About This Project
Desert mosses live closely with lichens and other microorganisms, together performing vital ecosystem services. However, their associated microbe and microfauna communities are not fully characterized. We will test the hypotheses that (1) moss-associated BSCs harbor distinct microfauna and microbiome communities relative to crusts lacking moss, and (2) that their microbiomes have enhanced functional potential for plant stress mitigation.
Ask the Scientists
Join The DiscussionWhat is the context of this research?
Drylands cover about one-third of the United States and represent important ecological and economic resources [1]. Within these ecosystems, desert mosses are key components of biological soil crusts (BSCs)—thin, soil surface layers of bryophytes, lichens, and microorganisms that contribute to soil stability, water infiltration, and nutrient cycling [2,3]. Occupying interspaces between larger plants, these “tiny heroes” form a critical, but often overlooked, component of these ecosystems. While BSCs are well studied as functional units, roles of individual community members within BSCs are poorly understood. Emerging evidence suggests microbial symbionts may contribute to stress tolerance in BSC mosses [4,5]. BSCs may also support insect biodiversity, but this relationship is understudied in California deserts [6]. We hypothesize that moss-associated BSCs harbor microbiomes enriched for stress mitigation and that BSC cover is positively associated with arthropod diversity.
What is the significance of this project?
BSCs are a vital component of drylands and persist under extreme fluctuations in light, temperature, and water availability [1]. They also support biodiversity by providing habitat and resources for micro- and macroinvertebrates [2,3]. However, interactions within BSCs and their symbiotic partners—including microbes and arthropods—remain poorly understood. Differences in BSC successional stages are associated with distinct biochemical activity and microbial composition [4], suggesting important but unresolved functional relationships. Microarthropods, many of which remain undescribed, are known to assemble in well-developed BSCs [5], indicating potential links between microbial and arthropod diversity. This work will provide foundational insight into multi-trophic interactions in BSCs, supporting future efforts to predict dryland ecosystem function and resilience under environmental change.
What are the goals of the project?
The goal of this project is to profile the microbiome of moss and non-moss BSC's across three California deserts, and record BSC associated insect activity at each site. We will collect 24 paired moss/non-moss crusts from each site and sample insects (micro and macro arthropods) at each site while estimating moss coverage of the larger site area. Larger vegetation, animals, insects and cryptogams will be documented on an iNaturalist project to gain an ecological profile of each site. A dataset generated by this project would provide meaningful insight into functional genes within BSC microbiomes and their potential implications for stress mitigation in extreme environments. Additionally, insect-BSC interactions are understudied in this area and documentation of arthropods associated with BSC's would contribute towards the growing body of research in this topic. Datasets will be shared openly to support the California All-Taxa Biodiversity Inventory (CalATBI).
Budget
The proposed funds would allow another student to contribute an additional dimension to an already funded project. Field work costs enable travel to three California desert sites (Mojave, Sonoran, Great Basin) to collect soil and arthropod samples. The DNA extraction kits and lab consumables will allow processing of soil samples for sequencing using an existing Nanopore kit, to characterize taxonomy and functional potential of the microbial community. Field work equipment ensures prepared travel and high-quality data collection, while sampling materials support proper specimen collection and storage. Lab consumables enable completion of DNA extractions for high quality sequencing output. Conference expenses will support presentation of results and student professional development. These items combined support the project goals of contributing vouchered specimens and molecular data to CalATBI, while training students in hands-on research and science communication.
Endorsed by
Project Timeline
The project will begin in June with sampling across three desert sites, followed by DNA extraction and metagenomic sequencing. During June and July, biological soil crusts will be processed to identify cryptogams and microinvertebrates. Data analysis will continue through the summer, followed by data and voucher deposition and manuscript submission in the fall. Voucher specimens will be deposited in the SFSU Harry D. Thiers Herbarium and Entomology Collection.
Apr 25, 2026
Project Launched
Jun 01, 2026
Project launch
Jun 14, 2026
Complete desert field collections
Jul 01, 2026
DNA extraction and sequencing
Aug 01, 2026
Cryptogam crust ID and arthropod ID
Meet the Team
Affiliates
Team Bio
The team tackling the larger deserts project in the MEEP lab at San Francisco State University is made up of two masters, one post-baccalaureate, and one undergraduate student. Led by principal investigator Jenna Ekwealor, PhD, this umbrella project is investigating prominent desert mosses in the genus Syntrichia and their unique physiology that allow it to persist in extreme environments. The team is interested in all areas of moss ecology, evolution, and physiology. See our work on iNaturalist
Abbey Schedler
I'm an NSF RaMP Scholar researching moss microbiomes. I'm interested in understanding symbiotic partnerships between mosses, lichens and their respective microbiomes.
Github, Linkedin, Orchid, iNaturalist
Paris Hendershot
Hello! I am a Masters student studying cell and molecular biology at San Francisco State University! I work and conduct research in the MEEP (Moss-Ecology-Evolutionary-Physiology) lab! I completed my Bachelor's in Science at the University of California Santa Cruz, and gained a deeper love and appreciation for our ecosystems.
Kanika Kolpe
Hey y'all! I'm a graduate student studying Cell and Molecular Biology. Currently, I am studying physiological responses of Syntrichia moss to climate variation in California deserts.
Nio Gonzalez
Hi! I’m Nio and I’m an undergraduate in the MEEP lab graduating this spring with a BS in Biology (Ecology) & Race and Resistance Studies. I’m fascinated by lichen, moss, soil microbiomes, and regenerative agriculture.
Jenna Ekwealor, Ph.D.
I am an Assistant Professor of Biology at San Francisco State University, where I lead the Moss Eco-Evo-Physio (MEEP) Lab. My group integrates plant physiology, ecology, and genomics to investigate how plants adapt to terrestrial challenges. We focus on three themes: mechanisms of stress tolerance, the processes that generate and maintain reproductive and life history diversity, and the evolutionary history of adaptation to extreme environments. To address these questions, we combine field and laboratory approaches—eco-physiological assays, reproductive studies, and molecular tools such as DNA sequencing and bioinformatics.
Much of my work centers on mosses and lichens: poikilohydric organisms that equilibrate with environmental moisture, suspending metabolism during dry periods and reactivating when hydrated. Their ability to survive extreme desiccation, solar radiation, and temperature variation makes them both resilient pioneers and sensitive indicators of environmental change. My research explores how these stressors shape their life history, reproduction, and evolutionary trajectories, with a focus on water availability and microclimate.
I am committed to mentoring students and creating opportunities for hands-on research training. This project reflects that commitment by combining traditional collecting, herbarium curation, and modern sequencing in ways that are accessible to students and community members. Through this work, I aim to advance scientific understanding of cryptogams and inspire the next generation of scientists to appreciate the resilience and ecological importance of these overlooked organisms.
Lab Notes
Nothing posted yet.
Additional Information
Bryophyte specimens will be deposited in the Harry D. Thiers Herbarium, and arthropods in the SFSU Entomology Collection, with duplicates deposited in the California Academy of Sciences when possible.
Project Backers
- 0Backers
- 0%Funded
- $0Total Donations
- $0Average Donation




