Can biome logs transform biomass from a problem to soil-ution?

San Jose State University
San Jose, California
BiologyEcologyGrant: California Species Collection
$2,500
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About This Project

As catastrophic megafires and flooding intensify across the western United States, fungi and other microbes are emerging as key allies in restoring ecological balance. Utilizing on-site organic matter, this study seeks to transform wildfire fuels into a resource for long-term soil and ecological resilience. The study measures soil microbial diversity, moisture retention, organic carbon, calcium and fuel reduction effectiveness amongst biome logs and other fuel treatments.

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What is the context of this research?

As wildfire frequency and severity intensify, understanding how wildfire and post-fire management influence soil conditions is increasingly important for guiding restoration and resilience efforts. Fuel treatments typically do not account for their adverse impacts on soil and the complex fungal and microbial communities that are critical to ecological health and climate adaptation. Ongoing debates regarding best practices for land management have illuminated a gap in our understanding of the ecological implications and effectiveness of different fuel treatments. This work integrates microbiology, forestry, and disaster mitigation through a transdisciplinary and collaborative approach to discover whether the biome logs methodology will increase soil moisture, enhance beneficial microbes, accelerate decomposition, and reduce wildfire risk more effectively than conventional fuel treatments such as pile burning and lop and scatter.

What is the significance of this project?

This study evaluates whether the biome logs methodology can increase soil moisture, reduce erosion, accelerate decomposition, and enhance beneficial microbes. Experimental comparisons among biome logs, pile burns, lop and scatter, and untreated controls are being conducted. The biome logs methodology aims to enhance carbon sequestration by increasing the transfer of carbon made available by saprotrophic fungi to mycorrhizal fungi. Supplemental inoculation with locally sourced biocompost is also expected to support fungal establishment and abundance. These microbial and soil processes are associated with greater resistance to combustion, increased carbon storage, improved soil stability, and enhanced post-fire recovery. To better understand how each fuel treatment influences soil microbial communities, environmental DNA (eDNA) analysis of soil samples from each treatment is required.

What are the goals of the project?

This research aims to contribute a scalable, ecologically-based methodology to the growing toolbox for wildfire-adapted land management in both burned and unburned landscapes, and investigate the ecological benefits and drawbacks of common fuel treatments. By developing an iterative framework for the integration of on-site biomass into soil, the biome logs project is developing strategies for mitigating fire and flood impacts while facilitating ecological regeneration and interspecies mutualism in the Santa Cruz Mountains and beyond. The scientific methods are expansive, and include consultations with members of the Amah Mutsun Tribal Band; aiming to address wounds that stem from colonization and the separation between humans, forests and microbial communities. With 18 plots sampled both at installation and one year post-treatment, this study will evaluate microbial community composition across a total of 36 soil samples at two study sites.

Budget

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Soil microbial communities are often overlooked for their contributions to soil moisture retention, biodiversity, vegetation resilience and wildfire risk reduction. In order to understand how biome logs and other fuel treatments impact soil microbial communities, it is important to examine fungal and microbial community composition before and after these treatments.

We are seeking additional funding to support the generation of robust, high-quality, publishable data that addresses a critical gap in scientific literature. The most immediate need is for eDNA soil microbe analysis, with a total cost of $10,957, which is essential to accurately quantify treatment effects. $1500 will advance this initiative, and an additional $4200 will be added as a stretch goal to fill the funding gap. $500 will support field work and $500 will further validate the research with macrofungi voucher specimen collection and fungarium submission.

Endorsed by

I have worked with Maya for more than 10 years and seen her amazing innovations in fire ecosystem recovery. The biome logs concept is scientifically and ecologically grounded and I can't wait to see the results.

Project Timeline

Fuel treatment installations are complete. Baseline soil samples were analyzed for carbon and elemental composition, while soil moisture monitoring continues monthly. Baseline eDNA samples were collected and frozen for future analysis. Macrofungi collections will be completed by Spring 2027. Final soil sampling will occur on December 6, 2026, with laboratory analysis expected to be completed by December 18, 2026. Data analysis and manuscript completion will occur in Spring 2027.

Dec 06, 2026

Second eDNA and elemental soil sample collection

Dec 18, 2026

eDNA soil analysis

Mar 16, 2027

Data analysis completion

Apr 30, 2027

Macrofungi collection completion

Apr 30, 2027

Manuscript submission

Meet the Team

Maya Elson
Maya Elson
Biome Logs Project Lead Scientist

Affiliates

CoRenewal, Center for Applied Ecological Remediation, San Jose State University
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Maya Elson

As an organizer, researcher, and educator, my work is rooted in the belief that human ingenuity and environmental stewardship are most powerful when informed by both Indigenous wisdom and rigorous scientific inquiry.

I earned a B.A. in Environmental Studies from The Evergreen State College in 2009, with a focus on Field Biology and Environmental Justice. During nine years in Olympia, Washington, I was deeply engaged in climate and forest activism, which shaped my commitment to community-based, science-backed solutions. I co-founded the Radical Mycology network, where for eight years I led applied mycology projects and educational programs that bridged grassroots organizing, ecological restoration, and public education.

Since joining CoRenewal (formerly the Amazon MycoRenewal Project) in 2012, I have been involved in interdisciplinary research and regeneration initiatives, including serving for five years as Executive Director. I am currently an MS in Environmental Studies candidate at San Jose State University. My graduate thesis is part of CoRenewal’s FENiXS Project, where I have participated in four previous studies investigating the use of beneficial microbes for erosion control, contaminant mitigation, forest fuel reduction, and ecological regeneration. This work directly supports my long-term goal: expanding ecologically based, science-supported tools for wildfire resilience. I have contributed to wildfire mitigation and bioremediation efforts in Los Angeles, Hawai‘i, Canada, Greece, and Lebanon, and aim to scale this impact further.

Complementing my scientific work, I hold a Graduate Certificate in Ecopsychology and have spent over 18 years facilitating nature connection. Through my company, MycoPsychology Experiences, I integrate human and ecological healing by teaching mycopermaculture, fungal biology, mycoremediation, and regenerative mushroom foraging—advancing solutions that benefit both people and the planet.

Lab Notes

Nothing posted yet.

Additional Information

The biome logs project is a part of CoRenewal's FENiXS program, described at this link.

Macrofungi samples will be collected, processed and placed in the fungarium at the Norris Center at the University of California, Santa Cruz.

Soil samples will be collected from control plots using the California ATBI protocol.

References

Busse, M. D., Pacific Southwest Research Station, issuing body, Hubbert, K. R., & Moghaddas, E. E. Y. (2014). Fuel reduction practices and their effects on soil quality. United States Department of Agriculture, Forest Service, Pacific Southwest Research Station.

Choreño-Parra, E. M., & Treseder, K. K. (2024). Mycorrhizal fungi modify decomposition: A meta-analysis. New Phytologist, 242(6), 2763–2774.

Cunningham, C.X., Williamson, G.J. & Bowman, D.M.J.S. Increasing frequency and intensity of the most extreme wildfires on Earth. Nature Ecology and Evolution (2024). https://doi.org/10.1038/s41559-024-02452-2

Hoeksema, J. D., Chaudhary, V. B., Gehring, C. A., Johnson, N. C., Karst, J., Koide, R. T., Pringle, A., Zabinski, C., Bever, J. D., Moore, J. C., Wilson, G. W. T., Klironomos, J. N., & Umbanhowar, J. (2010). A meta-analysis of context-dependency in plant response to inoculation with mycorrhizal fungi. Ecology Letters, 13(3), 394–407. https://doi.org/10.1111/j.1461...

Prior, L. D., French, B. J., Storey, K., Williamson, G. J., & Bowman, D. M. J. S. (2020). Soil moisture thresholds for combustion of organic soils in western Tasmania. International Journal of Wildland Fire, 29(7), 637–647. https://doi.org/10.1071/WF1919...

Ullah, M. R., Wegend, K., Kellner, H., Peršoh, D., & Borken, W. (2025). A mesocosm study on carbon transfer mechanisms from deadwood to litter through fungal hyphal growth. Applied Soil Ecology, 207, 105939. https://doi.org/10.1016/j.apsoil.2025.105939


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