Ellen Jorgensen

Ellen Jorgensen

May 06, 2024

Group 6 Copy 42
2

Expression Vectors!

Well, it took us longer than expected but we are excited to announce that we ligated the first four Open Enzymes into the expression vector pTiR yesterday! We chose four of our favorites: T4 DNA ligase, DpnI, EcoRI and its companion methylase EcoRi.M.

The pTiR plasmid was kindly supplied by Reclone.org, along with two other plasmids pTi and pTieR. We liked pTiR because it contains a red fluorescent protein gene that, if you do your Golden Gate assembly correctly, gets cut out of the plasmid. That means it 's easier to figure out which colonies on the plate post-transformation are worth picking because they will NOT be red anymore. For a better description of these plasmids see our accompanying project documentation.

Soon we will be able to start expressing the first of the Open Enzyme collection. Since Scott Pownall kindly supplied us with some of the useful parts from the E. coli ExpressionToolkit from FreeGenes we have added a His tag to our proteins so we can isolate them from the bacteria and a protease cleavage site to get rid of the tag afterwards. We would like to pause a moment to thank all the folks who worked to design these parts collections to make it easy to build plasmids using Golden Gate assembly. It is truly amazing how accessible genetic engineering has become.

In the meantime, we had some fun. Our group painted with bacteria expressing fluorescent proteins and we acquired a lab mascot - one of the new bioluminescent petunia plants from Light Bio.

GFP and RFP never fail to delight us!

Our new lab mascot, the Firefly petunia


2 comments

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  • Amanda Freise
    Amanda Freise
    super cool! I love your fluorescent art!
    Nov 12, 2024
  • OpenPETase
    OpenPETaseBacker
    This is great, not only what you did (achieving the milestone); but also HOW you did it (involving citizens).
    May 06, 2024

About This Project

Equitable access to biotechnology is a global challenge in low-resource settings where there is limited ability to source, safely transport and pay for expensive, temperature-sensitive reagents. Enzymes are the workhorse tools of biotech R&D. Can we turn our community lab into a hub of decentralized enzyme production/distribution and empower others to do the same worldwide with a step-by-step guide with best practices and starter tools?

Blast off!

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